STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_04410rRNA-processing protein FCF1 like protein. (192 aa)    
Predicted Functional Partners:
WN55_08259
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.998
WN55_00147
U3 small nucleolar RNA-associated protein 14 like protein A.
   
 0.998
WN55_02668
Nucleolar protein 6.
   
 0.997
WN55_08706
Ribosome biogenesis protein bms1.
   
 0.997
WN55_09879
WD repeat-containing protein 46.
   
 0.997
WN55_02539
U3 small nucleolar ribonucleoprotein IMP3.
   
 0.997
WN55_03482
Ribosomal RNA small subunit methyltransferase NEP1.
   
 0.997
WN55_04207
Nucleolar protein 58.
   
 0.997
WN55_06377
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.997
WN55_09614
Small subunit processome component 20 like protein.
   
 0.995
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
Server load: low (16%) [HD]