STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_04341DNA repair protein complementing XP-A cells like protein. (259 aa)    
Predicted Functional Partners:
WN55_01153
DNA repair endonuclease XPF.
    
 0.988
WN55_08411
TFIIH basal transcription factor complex helicase XPD subunit.
    
 0.987
WN55_07841
DNA excision repair protein ERCC-1.
    
 0.987
WN55_06421
DNA excision repair protein haywire.
    
 0.978
WN55_05575
DNA excision repair protein ERCC-6.
    
 0.951
WN55_04891
Crossover junction endonuclease MUS81.
    
 0.944
WN55_02307
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.938
WN55_04125
General transcription factor IIH subunit 3.
   
 0.934
WN55_09582
General transcription factor IIH subunit.
    
 0.924
WN55_09219
UV excision repair protein RAD23 like protein B.
    
 0.924
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.