STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_05652DNA repair protein XRCC2. (275 aa)    
Predicted Functional Partners:
WN55_10384
Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6/CTU1 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Belongs to the RecA family.
   
 0.967
WN55_07460
DNA repair protein XRCC3.
   
 0.932
WN55_06541
Breast cancer type 2 susceptibility protein like protein.
    
 0.848
WN55_01233
Double-strand break repair protein MRE11A; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.803
WN55_05151
Breast cancer type 1 susceptibility protein like protein.
   
 
 0.770
WN55_04963
BRCA1-associated RING domain protein 1.
   
 
 0.765
WN55_02148
Exonuclease 1.
   
 
 0.750
WN55_04891
Crossover junction endonuclease MUS81.
   
 
 0.727
WN55_00141
Serine-protein kinase ATM; Belongs to the PI3/PI4-kinase family.
     
 0.718
WN55_02979
DNA2-like helicase.
     
 0.684
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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