STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_05207Chromatin accessibility complex protein 1. (174 aa)    
Predicted Functional Partners:
WN55_05344
DNA polymerase epsilon subunit 3.
    
 0.996
WN55_09780
Nuclear transcription factor Y subunit beta.
   
 0.979
WN55_08328
Nuclear transcription factor Y subunit alpha.
    
 0.978
WN55_01390
Chromatin-remodeling complex ATPase chain Iswi.
    
 
 0.949
WN55_10088
Bromodomain adjacent to zinc finger domain protein 1A.
   
 
 0.863
WN55_09802
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.732
WN55_10604
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
     
 0.704
WN55_10911
Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily.
   
 0.672
WN55_08496
Cyclin-dependent kinase 6; Belongs to the protein kinase superfamily.
   
 0.666
WN55_03220
Cyclin-dependent kinase 14; Belongs to the protein kinase superfamily.
   
 0.666
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.