STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_05671DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1378 aa)    
Predicted Functional Partners:
WN55_05677
Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family.
   
 
 0.935
WN55_08639
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
   0.923
WN55_04422
Adenosylhomocysteinase.
     
 0.919
WN55_00148
S-adenosylmethionine decarboxylase proenzyme.
     
 0.914
WN55_11205
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
   
 0.878
WN55_05188
Histone-lysine N-methyltransferase E(Z).
   
 0.869
WN55_03356
DNA (Cytosine-5)-methyltransferase 3B; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 0.856
WN55_03674
E3 ubiquitin-protein ligase UHRF1.
   
 0.845
WN55_07415
YDG domain-containing protein.
   
 0.845
WN55_08787
Gamma-tubulin complex component.
    
 0.843
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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