STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_07318POU domain, class 6, transcription factor 2. (634 aa)    
Predicted Functional Partners:
WN55_00593
Sal-like protein 1.
    
 0.755
WN55_01466
Brain-specific homeobox protein.
   
 0.721
WN55_11499
snRNA-activating protein complex subunit 4.
    
  0.667
WN55_03580
CREB-binding protein.
    
 0.612
WN55_05076
Transcription factor AP-1.
    
 0.606
WN55_09743
Transcription initiation factor IIB.
    
 0.594
WN55_07491
General transcription factor IIE subunit 1.
    
  0.591
WN55_02994
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.588
WN55_05245
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.588
WN55_06430
Transcription initiation factor TFIID subunit 5.
    
  0.584
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.