STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_07880Uncharacterized protein C16orf48 like protein. (394 aa)    
Predicted Functional Partners:
WN55_00176
DNA repair protein XRCC1.
   
 0.925
WN55_07423
Bifunctional polynucleotide phosphatase/kinase.
    
 0.844
WN55_07716
X-ray repair cross-complementing protein 5.
    
 0.817
WN55_11119
TNFR-Cys domain-containing protein.
  
 0.811
WN55_11118
Uncharacterized protein.
  
 0.811
WN55_07427
DNA ligase.
  
 0.798
WN55_08639
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.791
WN55_00047
DNA polymerase.
  
 0.778
WN55_00235
DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.
   
 0.772
WN55_02148
Exonuclease 1.
   
 0.762
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.