STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_07981Cadherin-related family member 1. (130 aa)    
Predicted Functional Partners:
WN55_07439
Cadherin-86C.
 
    
 0.823
WN55_01920
Armadillo segment polarity protein.
    
 0.804
WN55_04040
Protocadherin-15.
 
 
 0.797
WN55_06714
Catenin delta-2.
    
 0.772
WN55_07834
Catenin alpha.
    
 0.772
WN55_06834
Cadherin-23.
 
      0.765
WN55_00198
Uridine kinase; Belongs to the uridine kinase family.
    
 0.726
WN55_03065
Putative uridine-cytidine kinase.
    
 0.726
WN55_02537
Vinculin.
    
 0.721
WN55_05031
Nicotinamide riboside kinase 1.
    
 0.712
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.