STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_07395Histone-arginine methyltransferase CARMER; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (710 aa)    
Predicted Functional Partners:
WN55_03580
CREB-binding protein.
    
 0.925
WN55_05854
Nuclear receptor coactivator 2.
    
 0.922
WN55_08769
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 
 0.910
WN55_08602
Histone H3; Belongs to the histone H3 family.
   
 0.803
WN55_03639
Histone H3; Belongs to the histone H3 family.
   
 0.803
WN55_04369
Histone H3; Belongs to the histone H3 family.
   
 0.803
WN55_10529
Transcription factor kayak.
    
 0.784
WN55_08068
Mitogen-activated protein kinase.
    
 0.777
WN55_05076
Transcription factor AP-1.
     
 0.770
WN55_05732
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.758
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.