WN55_07387 protein (Dufourea novaeangliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

WN55_07387

YEATS domain-containing protein 4. (227 aa)

Predicted Functional Partners:

WN55_04377

0.990

WN55_04742

0.984

WN55_03018

0.983

WN55_11241

0.981

WN55_11336

0.981

WN55_03980

0.981

WN55_04980

0.981

WN55_10757

0.968

WN55_01812

0.962

WN55_06355

0.927

Your Current Organism:

Dufourea novaeangliae

NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WN55_01812	WN55_03018	A0A154PDZ3	A0A154PHZ2	Zinc finger HIT domain-containing protein 1.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	0.989
WN55_01812	WN55_04377	A0A154PDZ3	A0A154PNR1	Zinc finger HIT domain-containing protein 1.	DNA methyltransferase 1-associated protein 1.	0.958
WN55_01812	WN55_04980	A0A154PDZ3	A0A154PQN1	Zinc finger HIT domain-containing protein 1.	Mortality factor 4-like protein 1.	0.637
WN55_01812	WN55_06355	A0A154PDZ3	A0A154PQE6	Zinc finger HIT domain-containing protein 1.	MRG-binding protein.	0.710
WN55_01812	WN55_07387	A0A154PDZ3	A0A154PUD2	Zinc finger HIT domain-containing protein 1.	YEATS domain-containing protein 4.	0.962
WN55_01812	WN55_10757	A0A154PDZ3	A0A154PA15	Zinc finger HIT domain-containing protein 1.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	0.985
WN55_01812	WN55_11336	A0A154PDZ3	A0A154PAG4	Zinc finger HIT domain-containing protein 1.	Vacuolar protein sorting-associated protein 72 like protein.	0.968
WN55_03018	WN55_01812	A0A154PHZ2	A0A154PDZ3	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Zinc finger HIT domain-containing protein 1.	0.989
WN55_03018	WN55_03980	A0A154PHZ2	A0A154PKR1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Inhibitor of growth protein.	0.940
WN55_03018	WN55_04377	A0A154PHZ2	A0A154PNR1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	DNA methyltransferase 1-associated protein 1.	0.992
WN55_03018	WN55_04742	A0A154PHZ2	A0A154P1U9	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Enhancer of polycomb-like protein.	0.921
WN55_03018	WN55_04980	A0A154PHZ2	A0A154PQN1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Mortality factor 4-like protein 1.	0.934
WN55_03018	WN55_06355	A0A154PHZ2	A0A154PQE6	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	MRG-binding protein.	0.955
WN55_03018	WN55_07387	A0A154PHZ2	A0A154PUD2	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	YEATS domain-containing protein 4.	0.983
WN55_03018	WN55_10757	A0A154PHZ2	A0A154PA15	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	0.999
WN55_03018	WN55_11241	A0A154PHZ2	A0A154P9P2	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.	0.992
WN55_03018	WN55_11336	A0A154PHZ2	A0A154PAG4	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Vacuolar protein sorting-associated protein 72 like protein.	0.984
WN55_03980	WN55_03018	A0A154PKR1	A0A154PHZ2	Inhibitor of growth protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	0.940
WN55_03980	WN55_04377	A0A154PKR1	A0A154PNR1	Inhibitor of growth protein.	DNA methyltransferase 1-associated protein 1.	0.986
WN55_03980	WN55_04742	A0A154PKR1	A0A154P1U9	Inhibitor of growth protein.	Enhancer of polycomb-like protein.	0.995