STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI69733.1Hypothetical protein. (452 aa)    
Predicted Functional Partners:
rlmK
Ribosomal RNA large subunit methyltransferase K.
       0.727
CVI69409.1
Multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1.
  
  0.600
celE
Endoglucanase E precursor.
  
  0.600
rhgT
Rhamnogalacturonan acetylesterase RhgT.
  
  0.600
CVI65312.1
Phage head-tail joining protein.
  
   0.590
CVI72319.1
Phage tail protein.
  
   0.583
CVI72317.1
Hypothetical protein.
  
 
 0.579
CVI65321.1
Phage portal protein.
  
   0.561
CVI72339.1
Phage portal protein.
  
   0.561
CVI68520.1
Hypothetical protein.
  
 0.510
Your Current Organism:
Clostridiales bacterium CHKCI001
NCBI taxonomy Id: 1780378
Other names: C. bacterium CHKCI001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.