STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macB_10Macrolide export ATP-binding/permease protein MacB. (690 aa)    
Predicted Functional Partners:
macB_9
Macrolide export ATP-binding/permease protein MacB.
 
0.996
macB_1
Macrolide export ATP-binding/permease protein MacB.
 
0.983
ytrF_2
ABC transporter permease YtrF precursor.
  
 0.982
macB_2
Macrolide export ATP-binding/permease protein MacB.
 
0.960
yxdL_1
ABC transporter ATP-binding protein YxdL.
 
0.960
macB_6
Macrolide export ATP-binding/permease protein MacB.
 
0.960
cysA_1
Sulfate/thiosulfate import ATP-binding protein CysA.
 
0.960
cysA_2
Sulfate/thiosulfate import ATP-binding protein CysA.
 
0.960
CVH74503.1
Hypothetical protein.
  
 0.947
CVH76994.1
Intermediate filament tail domain protein.
  
 0.947
Your Current Organism:
Clostridiales bacterium CHKCI006
NCBI taxonomy Id: 1780379
Other names: C. bacterium CHKCI006
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.