STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecfA3Energy-coupling factor transporter ATP-binding protein EcfA3; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (289 aa)    
Predicted Functional Partners:
cbiM
Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 0.997
cbiQ
Cobalt transport protein CbiQ.
 
 0.994
ecfT_9
Energy-coupling factor transporter transmembrane protein EcfT.
 0.991
cbiN
Cobalt transport protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
 
 
 0.980
bioY
Biotin transporter BioY.
   
 0.976
ecsA
ABC-type transporter ATP-binding protein EcsA.
 
  
 
0.912
ybhF_4
Putative ABC transporter ATP-binding protein YbhF.
 
  
 
0.909
drrA_1
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
  
 
0.907
oppD_2
Oligopeptide transport ATP-binding protein OppD.
 
     
0.897
oppD_1
Oligopeptide transport ATP-binding protein OppD.
 
    
0.894
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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