STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI66625.1Hypothetical protein. (542 aa)    
Predicted Functional Partners:
CVI66622.1
Hypothetical protein.
 
     0.928
CVI66629.1
Hypothetical protein.
 
     0.902
CVI66632.1
Bacterial type II secretion system protein F domain protein.
 
    0.819
CVI66627.1
Hypothetical protein.
       0.800
CVI74049.1
Hypothetical protein.
  
   0.781
CVI66429.1
Hypothetical protein.
  
     0.774
CVI67082.1
Hypothetical protein.
  
     0.774
CVI67085.1
Hypothetical protein.
  
     0.774
scpA
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.774
CVI65795.1
Hypothetical protein.
  
     0.772
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.