STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI66635.1Putative conjugal transfer protein/MT3759. (416 aa)    
Predicted Functional Partners:
CVI66632.1
Bacterial type II secretion system protein F domain protein.
 
  
 0.983
CVI66629.1
Hypothetical protein.
 
  
 0.934
CVI66638.1
Hypothetical protein.
       0.777
CVI66622.1
Hypothetical protein.
 
  
 0.706
CVI66625.1
Hypothetical protein.
 
     0.618
CVI70370.1
Photosystem I assembly protein Ycf3.
  
  
 0.561
CVI66641.1
SigmaK-factor processing regulatory protein BofA.
       0.504
embR
Transcriptional regulatory protein EmbR.
 
   
 0.501
CVI66627.1
Hypothetical protein.
       0.467
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.