STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yxlF_2Putative ABC transporter ATP-binding protein YxlF. (210 aa)    
Predicted Functional Partners:
CVI72825.1
ABC-2 family transporter protein.
 
  0.770
CVI71156.1
Hypothetical protein.
   
  0.731
CVI71663.1
ABC-2 family transporter protein.
   
  0.731
CVI72566.1
ABC-2 family transporter protein.
   
  0.731
cysNC
Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
     
 0.701
CVI73962.1
Hypothetical protein.
  
 0.699
CVI73276.1
ABC-2 family transporter protein.
   
  0.689
CVI73447.1
Hypothetical protein.
   
  0.689
CVI71720.1
ABC-2 family transporter protein.
 
 
  0.640
bceA
Bacitracin export ATP-binding protein BceA.
 
 
 
0.610
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.