STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI67968.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
CVI67969.1
Hypothetical protein.
       0.773
CVI67972.1
Relaxase/mobilization nuclease domain protein.
       0.773
CVI67975.1
Hypothetical protein.
       0.610
CVI67978.1
Hypothetical protein.
       0.610
CVI67965.1
Hypothetical protein.
       0.586
CVI67980.1
Hypothetical protein.
       0.542
CVI67983.1
Hypothetical protein.
       0.510
CVI67985.1
Hypothetical protein.
       0.510
CVI67986.1
Type IV secretory system Conjugative DNA transfer.
       0.418
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.