STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI68037.1Hypothetical protein. (171 aa)    
Predicted Functional Partners:
spo0C_7
Chromosome-partitioning protein Spo0J; Belongs to the ParB family.
 
     0.965
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
 0.813
CVI68040.1
Hypothetical protein.
       0.737
CVI68045.1
Hypothetical protein.
 
     0.680
CVI68043.1
Hypothetical protein.
       0.665
spo0C_5
Chromosome-partitioning protein Spo0J; Belongs to the ParB family.
 
     0.655
CVI73642.1
Hypothetical protein.
 
     0.632
parB_1
Chromosome-partitioning protein ParB; Belongs to the ParB family.
 
     0.584
CVI71684.1
Hypothetical protein.
 
     0.573
CVI72512.1
Hypothetical protein.
 
     0.564
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.