STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI68954.1Hypothetical protein. (385 aa)    
Predicted Functional Partners:
CVI71152.1
Hypothetical protein.
  
 
   0.774
CVI67938.1
Hypothetical protein.
  
     0.769
CVI71095.1
Hypothetical protein.
  
     0.769
CVI71487.1
Hypothetical protein.
  
     0.768
noc
Nucleoid occlusion protein.
  
     0.748
CVI67085.1
Hypothetical protein.
  
     0.747
CVI67181.1
Glycosyl hydrolases family 25.
  
     0.745
CVI67082.1
Hypothetical protein.
  
     0.736
CVI73769.1
Hypothetical protein.
  
     0.734
CVI67080.1
Hypothetical protein.
  
     0.727
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.