STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI69460.1SEFIR domain protein. (382 aa)    
Predicted Functional Partners:
CVI69466.1
Hypothetical protein.
 
     0.859
CVI69463.1
Hypothetical protein.
 
     0.858
CVI69469.1
Hypothetical protein.
 
     0.836
CVI69458.1
Eco57I restriction-modification methylase.
 
     0.808
CVI73958.1
Hypothetical protein.
  
     0.761
CVI69456.1
Hypothetical protein.
       0.746
CVI73959.1
Hypothetical protein.
  
     0.660
CVI69455.1
Divergent AAA domain protein.
       0.613
CVI73960.1
RES domain protein.
  
     0.541
CVI69471.1
Hypothetical protein.
       0.532
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.