STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI69592.1Flavodoxin. (252 aa)    
Predicted Functional Partners:
yvqK
Cob(I)yrinic acid a,c-diamide adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
     
 0.812
dkgA
2,5-diketo-D-gluconic acid reductase A.
      0.780
cdr
Coenzyme A disulfide reductase.
    
  0.693
CVI69587.1
Hypothetical protein.
 
    0.690
yvgN
Glyoxal reductase.
      0.688
CVI66143.1
Hypothetical protein.
      0.666
CVI69590.1
Hypothetical protein.
       0.634
CVI65175.1
Alpha/beta hydrolase family protein.
 
     0.630
nifJ
Pyruvate-flavodoxin oxidoreductase.
     
 0.629
CVI69584.1
Putative permease.
  
    0.547
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.