STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuAMannonate dehydratase; Catalyzes the dehydration of D-mannonate. (349 aa)    
Predicted Functional Partners:
kdgK
2-dehydro-3-deoxygluconokinase.
 
  
 0.979
eda
Putative KHG/KDPG aldolase.
 
   
 0.904
fabG_2
3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.853
fabG_1
3-oxoacyl-[acyl-carrier-protein] reductase FabG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.849
iolC
5-dehydro-2-deoxygluconokinase.
    
 0.815
ydjH
Putative sugar kinase YdjH; Belongs to the carbohydrate kinase PfkB family.
    
 0.815
CVI66470.1
Phosphotyrosine-protein phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
   
 
  0.806
rpiB_1
Ribose-5-phosphate isomerase B.
   
 
  0.756
rpiB_2
Ribose-5-phosphate isomerase B.
   
 
  0.756
dlgD
2,3-diketo-L-gulonate reductase; Belongs to the LDH2/MDH2 oxidoreductase family.
 
    0.746
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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