STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI69752.1Hypothetical protein. (371 aa)    
Predicted Functional Partners:
CVI67938.1
Hypothetical protein.
  
  0.828
CVI71487.1
Hypothetical protein.
  
  0.824
CVI65778.1
Hypothetical protein.
  
 
   0.788
CVI73769.1
Hypothetical protein.
  
 
   0.781
CVI70510.1
Hypothetical protein.
  
     0.772
CVI71831.1
Hypothetical protein.
  
     0.772
CVI67681.1
FMN-binding domain protein.
  
     0.769
CVI70517.1
Fibronectin type III domain protein.
  
     0.764
CVI65208.1
Hypothetical protein.
  
     0.762
CVI68365.1
Hypothetical protein.
  
     0.748
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.