STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI70829.1Hypothetical protein. (531 aa)    
Predicted Functional Partners:
CVI70831.1
Hypothetical protein.
       0.773
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.756
rpfC
Sensory/regulatory protein RpfC.
    
 0.753
eccCa1
ESX-1 secretion system protein EccCa1.
   
 
 0.737
CVI70827.1
Hypothetical protein.
       0.689
pyk_3
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
  0.686
CVI71361.1
FHA domain protein.
  
 
 0.637
CVI70834.1
Hypothetical protein.
       0.558
embR
Transcriptional regulatory protein EmbR.
   
   0.524
CVI70824.1
Hypothetical protein.
  
    0.522
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.