STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI71511.1Hypothetical protein. (799 aa)    
Predicted Functional Partners:
CVI71508.1
AAA-like domain protein.
 
    0.916
CVI71487.1
Hypothetical protein.
 
     0.854
lytG_3
Exo-glucosaminidase LytG precursor.
  
 
 0.791
CVI65790.1
LysM domain/BON superfamily protein.
  
 
  0.789
CVI74013.1
Bacterial Ig-like domain (group 2).
  
 
  0.782
CVI71505.1
PrgI family protein.
  
    0.779
CVI65717.1
Hypothetical protein.
  
     0.768
CVI71095.1
Hypothetical protein.
  
     0.768
CVI67938.1
Hypothetical protein.
  
     0.767
CVI67181.1
Glycosyl hydrolases family 25.
  
     0.747
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.