STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI71588.1AAA-like domain protein. (793 aa)    
Predicted Functional Partners:
CVI71584.1
PrgI family protein.
     0.938
CVI71582.1
Hypothetical protein.
 
     0.928
CVI71592.1
Hypothetical protein.
    0.891
CVI64958.1
Hypothetical protein.
     0.782
CVI71596.1
Hypothetical protein.
 
     0.779
CVI73596.1
TraM recognition site of TraD and TraG.
 
    0.778
CVI73641.1
Type IV secretory system Conjugative DNA transfer.
 
    0.778
CVI73756.1
Type IV secretory system Conjugative DNA transfer.
 
    0.776
traG_2
Conjugal transfer protein TraG.
 
    0.776
CVI71590.1
Hypothetical protein.
       0.773
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.