STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tagH_1Teichoic acids export ATP-binding protein TagH. (247 aa)    
Predicted Functional Partners:
CVI71939.1
ABC-2 type transporter.
 
 0.999
tagG
Teichoic acid translocation permease protein TagG.
 
 0.997
kfoC_1
Chondroitin synthase.
 
  
 0.788
kfoC_2
Chondroitin synthase.
 
  
 0.786
tagB_2
Putative CDP-glycerol:glycerophosphate glycerophosphotransferase.
 
 
 0.622
tagB_1
Putative CDP-glycerol:glycerophosphate glycerophosphotransferase.
 
 
 0.614
CVI68334.1
DNA utilization protein GntX.
   
    0.552
CVI68472.1
Putative ABC transporter ATP-binding protein/MT1014.
 
      0.521
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.512
vat
Virginiamycin A acetyltransferase.
      0.501
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.