STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI72205.1Hypothetical protein. (384 aa)    
Predicted Functional Partners:
CVI69463.1
Hypothetical protein.
  
  
 0.656
lon_1
Lon protease.
  
  
 0.652
CVI73243.1
Transposase DDE domain protein.
  
  
 0.578
CVI73244.1
Hypothetical protein.
  
  
 0.578
recD2_2
ATP-dependent RecD-like DNA helicase.
   
    0.565
CVI67489.1
Divergent AAA domain protein.
  
     0.524
CVI73335.1
Fibronectin-binding protein A N-terminus (FbpA).
  
  
 0.516
CVI73514.1
Hypothetical protein.
  
     0.497
hemB
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
       0.495
CVI70184.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.