STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI72433.1Iron hydrogenase 1. (489 aa)    
Predicted Functional Partners:
hndC
NADP-reducing hydrogenase subunit HndC.
 
 
 0.999
gltD_1
Glutamate synthase [NADPH] small chain.
 0.981
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
 0.979
nuoE
NADH-quinone oxidoreductase subunit E.
 
 0.973
CVI70112.1
Ferredoxin.
   
 0.963
rnfB
Electron transport complex protein rnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 
 0.948
hcnA
Hydrogen cyanide synthase subunit HcnA.
   
 0.947
cysNC
Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
  
 
 0.919
CVI73299.1
Iron hydrogenase 1.
 
  
0.903
pyk_3
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.889
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.