STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI72448.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
CVI72447.1
Hypothetical protein.
 
    0.942
CVI72450.1
FtsK/SpoIIIE family protein.
 
    0.897
CVI72451.1
Replication initiation factor.
 
  
 0.868
CVI72453.1
Hypothetical protein.
 
     0.819
CVI69494.1
Replication initiation factor.
 
  
 0.811
CVI65826.1
Replication initiation factor.
 
  
 0.810
CVI65815.1
Hypothetical protein.
 
    0.797
CVI69486.1
Hypothetical protein.
 
    0.797
CVI65822.1
FtsK/SpoIIIE family protein.
 
    0.794
CVI69491.1
FtsK/SpoIIIE family protein.
 
    0.794
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.