STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI72455.1SnoaL-like polyketide cyclase. (136 aa)    
Predicted Functional Partners:
CVI72457.1
Putative acetyltransferase.
       0.727
CVI72458.1
Hypothetical protein.
 
     0.703
CVI72452.1
Hypothetical protein.
       0.446
CVI72453.1
Hypothetical protein.
       0.446
CVI73622.1
Hypothetical protein.
  
     0.436
CVI72451.1
Replication initiation factor.
       0.426
CVI72459.1
Hypothetical protein.
       0.426
CVI72460.1
Antirestriction protein (ArdA).
       0.426
CVI72479.1
ABC-2 type transporter.
 
     0.418
CVI72462.1
Antirestriction protein (ArdA).
       0.403
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.