STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI72479.1ABC-2 type transporter. (187 aa)    
Predicted Functional Partners:
ybhF_4
Putative ABC transporter ATP-binding protein YbhF.
 
 
 0.979
CVI72473.1
Zinc-responsive transcriptional regulator.
 
     0.910
CVI68994.1
Hypothetical protein.
 
 
  0.633
ecsA
ABC-type transporter ATP-binding protein EcsA.
  
 
  0.613
CVI71361.1
FHA domain protein.
  
 
 0.611
ytrB_1
ABC transporter ATP-binding protein YtrB.
  
 
 0.606
ybhF_2
Putative ABC transporter ATP-binding protein YbhF.
  
 
 0.606
ybhF_3
Putative ABC transporter ATP-binding protein YbhF.
  
 
 0.606
yxlF_5
Putative ABC transporter ATP-binding protein YxlF.
  
 
 0.606
yxlF_6
Putative ABC transporter ATP-binding protein YxlF.
  
 
 0.606
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.