STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI73084.1Hypothetical protein. (141 aa)    
Predicted Functional Partners:
CVI73083.1
Phd_YefM; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
    0.792
CVI73086.1
DNA polymerase III subunit delta.
       0.655
CVI73079.1
Sporulation and spore germination.
       0.588
CVI73081.1
ComEC family competence protein.
       0.588
yycG_3
Sensor histidine kinase YycG.
       0.539
CVI71567.1
Hypothetical protein.
  
     0.498
yycF_6
Transcriptional regulatory protein YycF.
       0.479
CVI72649.1
Hypothetical protein.
  
     0.477
CVI69742.1
Hypothetical protein.
  
     0.467
comEA
ComE operon protein 1.
       0.462
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.