STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI73640.1Recombinase. (626 aa)    
Predicted Functional Partners:
CVI73641.1
Type IV secretory system Conjugative DNA transfer.
 
    0.890
CVI73639.1
Hypothetical protein.
 
     0.799
mobA_1
Mobilization protein A.
  
     0.747
hin
DNA-invertase hin.
  
     0.660
CVI73642.1
Hypothetical protein.
       0.568
CVI73622.1
Hypothetical protein.
  
     0.536
CVI73604.1
Hypothetical protein; N-terminal phage replisome organiser (Phage_rep_org_N).
  
     0.487
dnaC_3
DNA replication protein DnaC.
  
     0.483
CVI73620.1
RNA polymerase sigma factor.
  
     0.482
mobA_2
Mobilization protein A.
  
     0.428
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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