STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaI_4Primosomal protein DnaI. (280 aa)    
Predicted Functional Partners:
CVI73839.1
Replication initiator protein A (RepA) N-terminus.
    0.930
CVI73841.1
Hypothetical protein.
 
     0.922
CVI73837.1
Relaxase/mobilization nuclease domain protein.
 
     0.896
CVI73836.1
Bacterial mobilization protein (MobC).
 
     0.870
CVI70546.1
Hypothetical protein.
 
    0.777
CVI73747.1
Relaxase/mobilization nuclease domain protein.
 
     0.772
CVI74141.1
Relaxase/mobilization nuclease domain protein.
 
     0.772
CVI73567.1
Relaxase/mobilization nuclease domain protein.
 
     0.771
CVI73743.1
Hypothetical protein.
 
     0.715
CVI70542.1
Hypothetical protein.
 
     0.714
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.