STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI74109.1Fibronectin type III domain protein. (3378 aa)    
Predicted Functional Partners:
CVI67938.1
Hypothetical protein.
  
  
  0.811
CVI71487.1
Hypothetical protein.
  
  
  0.810
CVI68797.1
Outer membrane lipoprotein.
  
 
  0.785
CVI65717.1
Hypothetical protein.
  
     0.766
CVI71095.1
Hypothetical protein.
  
     0.766
noc
Nucleoid occlusion protein.
  
     0.760
CVI67085.1
Hypothetical protein.
  
     0.757
CVI74013.1
Bacterial Ig-like domain (group 2).
  
     0.746
CVI72653.1
Bacterial Ig-like domain (group 2).
  
     0.739
CVI72712.1
Listeria-Bacteroides repeat domain (List_Bact_rpt).
 
   
 0.739
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.