STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001577215_00908Unannotated protein. (228 aa)    
Predicted Functional Partners:
GCA_001577215_00907
Unannotated protein.
       0.791
GCA_001577215_00899
Unannotated protein.
  
 
  0.736
GCA_001577215_00208
Unannotated protein.
  
 
  0.687
GCA_001577215_00297
Unannotated protein.
    
 0.676
GCA_001577215_00711
Unannotated protein.
    
  0.667
GCA_001577215_00718
Unannotated protein.
    
  0.637
GCA_001577215_00900
Unannotated protein.
   
 
  0.634
GCA_001577215_00790
Unannotated protein.
     
 0.633
GCA_001577215_00871
Unannotated protein.
    
  0.626
GCA_001577215_00909
Unannotated protein.
  
  
 0.614
Your Current Organism:
Marinimicrobia bacterium TCS52
NCBI taxonomy Id: 1781243
Other names: M. bacterium TCS52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.