STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001577025_00227Unannotated protein. (161 aa)    
Predicted Functional Partners:
GCA_001577025_00431
Unannotated protein.
  
    0.779
GCA_001577025_00226
Unannotated protein.
       0.775
GCA_001577025_01038
Unannotated protein.
  
     0.762
GCA_001577025_00030
Unannotated protein.
  
     0.751
GCA_001577025_00031
Unannotated protein.
  
     0.743
GCA_001577025_01564
Unannotated protein.
  
     0.730
GCA_001577025_00980
Unannotated protein.
  
     0.717
GCA_001577025_00432
Unannotated protein.
  
     0.697
GCA_001577025_01144
Unannotated protein.
 
     0.689
GCA_001577025_00029
Unannotated protein.
  
     0.679
Your Current Organism:
Marinimicrobia bacterium TCS55
NCBI taxonomy Id: 1781246
Other names: M. bacterium TCS55
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.