STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001577055_00040Unannotated protein. (247 aa)    
Predicted Functional Partners:
GCA_001577055_00388
Unannotated protein.
 
 
 
 0.878
GCA_001577055_00387
Unannotated protein.
 
 
 
 0.875
GCA_001577055_00529
Unannotated protein.
 
  
 0.785
GCA_001577055_01232
Unannotated protein.
 
  
 0.785
GCA_001577055_00041
Unannotated protein.
     
 0.774
GCA_001577055_01235
Unannotated protein.
 
     0.774
GCA_001577055_00527
Unannotated protein.
  
     0.765
GCA_001577055_01434
Unannotated protein.
  
 
 0.762
GCA_001577055_00390
Unannotated protein.
 
 
 
 0.711
GCA_001577055_00715
Unannotated protein.
 
  
 0.670
Your Current Organism:
Marinimicrobia bacterium TCS56
NCBI taxonomy Id: 1781247
Other names: M. bacterium TCS56
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.