STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001577055_00431Unannotated protein. (579 aa)    
Predicted Functional Partners:
GCA_001577055_00434
Unannotated protein.
       0.780
GCA_001577055_00430
Unannotated protein.
       0.778
GCA_001577055_00432
Unannotated protein.
       0.773
GCA_001577055_00433
Unannotated protein.
       0.773
GCA_001577055_01674
Unannotated protein.
   
 
 0.748
GCA_001577055_00720
Unannotated protein.
  
  
 0.645
GCA_001577055_00428
Unannotated protein.
     
 0.550
GCA_001577055_00672
Unannotated protein.
  
   
 0.548
GCA_001577055_00427
Unannotated protein.
       0.545
GCA_001577055_00435
Unannotated protein.
       0.542
Your Current Organism:
Marinimicrobia bacterium TCS56
NCBI taxonomy Id: 1781247
Other names: M. bacterium TCS56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.