STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001577055_01211Unannotated protein. (250 aa)    
Predicted Functional Partners:
GCA_001577055_00626
Unannotated protein.
 
 
 0.902
GCA_001577055_01453
Unannotated protein.
 
  
 0.896
GCA_001577055_01478
Unannotated protein.
 
  
 0.842
GCA_001577055_01210
Unannotated protein.
   
   0.817
GCA_001577055_01215
Unannotated protein.
  
    0.802
GCA_001577055_00760
Unannotated protein.
 
 
 0.796
GCA_001577055_01214
Unannotated protein.
  
    0.794
GCA_001577055_01209
Unannotated protein.
  
    0.787
GCA_001577055_01447
Unannotated protein.
    
 0.784
GCA_001577055_01213
Unannotated protein.
  
  
 0.783
Your Current Organism:
Marinimicrobia bacterium TCS56
NCBI taxonomy Id: 1781247
Other names: M. bacterium TCS56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.