STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001577055_01217Unannotated protein. (235 aa)    
Predicted Functional Partners:
GCA_001577055_01214
Unannotated protein.
       0.773
GCA_001577055_01215
Unannotated protein.
       0.773
GCA_001577055_01216
Unannotated protein.
       0.773
GCA_001577055_01209
Unannotated protein.
       0.762
GCA_001577055_01210
Unannotated protein.
       0.762
GCA_001577055_01211
Unannotated protein.
       0.762
GCA_001577055_01212
Unannotated protein.
       0.762
GCA_001577055_01213
Unannotated protein.
       0.762
GCA_001577055_01218
Unannotated protein.
       0.668
GCA_001577055_01246
Unannotated protein.
  
     0.645
Your Current Organism:
Marinimicrobia bacterium TCS56
NCBI taxonomy Id: 1781247
Other names: M. bacterium TCS56
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.