STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001577055_01566Unannotated protein. (366 aa)    
Predicted Functional Partners:
GCA_001577055_00869
Unannotated protein.
  
 
 0.940
GCA_001577055_00625
Unannotated protein.
  
 
  0.845
GCA_001577055_01731
Unannotated protein.
  
 0.836
GCA_001577055_00047
Unannotated protein.
  
 0.832
GCA_001577055_01195
Unannotated protein.
   
 0.817
GCA_001577055_01567
Unannotated protein.
       0.800
GCA_001577055_01249
Unannotated protein.
  
 
 0.786
GCA_001577055_00588
Unannotated protein.
  
 
 0.774
GCA_001577055_01358
Unannotated protein.
  
 
 0.773
GCA_001577055_00174
Unannotated protein.
  
 
 0.762
Your Current Organism:
Marinimicrobia bacterium TCS56
NCBI taxonomy Id: 1781247
Other names: M. bacterium TCS56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.