STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEJ74295.1Carotene isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (513 aa)    
Predicted Functional Partners:
OEJ73407.1
Phytoene desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.917
OEJ73408.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.909
OEJ72761.1
9,9'-di-cis-zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
 
  
 0.905
OEJ76719.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.841
OEJ74060.1
Flavin-dependent dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.770
OEJ73171.1
Geranylgeranyl reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.741
OEJ73557.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.739
OEJ75649.1
Magnesium chelatase ATPase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
 
 0.716
OEJ73479.1
Chlorophyll synthase ChlG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.702
OEJ75768.1
TIGR04168 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.654
Your Current Organism:
Desertifilum sp. IPPASB1220
NCBI taxonomy Id: 1781255
Other names: D. sp. IPPAS B-1220, Desertifilum sp. IPPAS B-1220
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