STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEJ74303.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)    
Predicted Functional Partners:
OEJ74268.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family.
 0.999
OEJ74304.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.997
OEJ72747.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.899
OEJ76065.1
Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.879
OEJ75747.1
Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.858
OEJ75907.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.830
OEJ76760.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.823
OEJ76761.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.823
OEJ75909.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
   
  0.823
OEJ74139.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
   
  0.823
Your Current Organism:
Desertifilum sp. IPPASB1220
NCBI taxonomy Id: 1781255
Other names: D. sp. IPPAS B-1220, Desertifilum sp. IPPAS B-1220
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