STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEJ73407.1Phytoene desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)    
Predicted Functional Partners:
OEJ73408.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.982
OEJ75589.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.932
OEJ74295.1
Carotene isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.917
OEJ72991.1
All-trans-retinol 13,14-reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.784
OEJ75436.1
Photosystem II manganese-stabilizing polypeptide; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
OEJ73595.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
OEJ74566.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.765
psb28
Photosystem II reaction center protein Psb28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Psb28 family.
  
     0.763
OEJ72761.1
9,9'-di-cis-zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
  
 
0.763
OEJ74413.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.762
Your Current Organism:
Desertifilum sp. IPPASB1220
NCBI taxonomy Id: 1781255
Other names: D. sp. IPPAS B-1220, Desertifilum sp. IPPAS B-1220
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.