OEJ73035.1 protein (Desertifilum sp. IPPASB1220)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

OEJ73035.1

LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)

Predicted Functional Partners:

OEJ74080.1

0.997

OEJ74079.1

0.996

OEJ74094.1

0.988

OEJ75341.1

0.958

OEJ75687.1

0.771

OEJ74588.1

0.771

OEJ77220.1

0.770

OEJ76764.1

0.770

OEJ74577.1

0.766

OEJ75536.1

0.765

Your Current Organism:

Desertifilum sp. IPPASB1220

NCBI taxonomy Id: 1781255
Other names: D. sp. IPPAS B-1220, Desertifilum sp. IPPAS B-1220

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OEJ73035.1	OEJ74079.1	BH720_21845	BH720_16430	LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
OEJ73035.1	OEJ74080.1	BH720_21845	BH720_16435	LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.	OstA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
OEJ73035.1	OEJ74094.1	BH720_21845	BH720_16425	LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
OEJ73035.1	OEJ74577.1	BH720_21845	BH720_13980	LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.766
OEJ73035.1	OEJ74588.1	BH720_21845	BH720_13955	LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771
OEJ73035.1	OEJ75341.1	BH720_21845	BH720_10115	LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.958
OEJ73035.1	OEJ75536.1	BH720_21845	BH720_09135	LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.765
OEJ73035.1	OEJ75687.1	BH720_21845	BH720_07865	LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.771
OEJ73035.1	OEJ76764.1	BH720_21845	BH720_03110	LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
OEJ73035.1	OEJ77220.1	BH720_21845	BH720_00665	LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.770
OEJ74079.1	OEJ73035.1	BH720_16430	BH720_21845	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
OEJ74079.1	OEJ74080.1	BH720_16430	BH720_16435	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	OstA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
OEJ74079.1	OEJ74094.1	BH720_16430	BH720_16425	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
OEJ74079.1	OEJ75341.1	BH720_16430	BH720_10115	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.829
OEJ74080.1	OEJ73035.1	BH720_16435	BH720_21845	OstA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
OEJ74080.1	OEJ74079.1	BH720_16435	BH720_16430	OstA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
OEJ74080.1	OEJ74094.1	BH720_16435	BH720_16425	OstA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.879
OEJ74080.1	OEJ74577.1	BH720_16435	BH720_13980	OstA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.470
OEJ74080.1	OEJ75341.1	BH720_16435	BH720_10115	OstA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.988
OEJ74080.1	OEJ75536.1	BH720_16435	BH720_09135	OstA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.775