OEJ73047.1 protein (Desertifilum sp. IPPASB1220)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

OEJ73047.1

Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)

Predicted Functional Partners:

OEJ73043.1

0.990

OEJ76815.1

0.958

BH720_18300

0.942

OEJ76704.1

0.935

OEJ76703.1

0.907

OEJ76814.1

0.803

OEJ76800.1

0.792

OEJ76624.1

0.792

OEJ75799.1

0.792

OEJ74079.1

0.742

Your Current Organism:

Desertifilum sp. IPPASB1220

NCBI taxonomy Id: 1781255
Other names: D. sp. IPPAS B-1220, Desertifilum sp. IPPAS B-1220

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BH720_18300	OEJ73047.1	BH720_18300	BH720_21885	Biopolymer transporter ExbB; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
BH720_18300	OEJ75799.1	BH720_18300	BH720_07665	Biopolymer transporter ExbB; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.755
BH720_18300	OEJ76624.1	BH720_18300	BH720_03445	Biopolymer transporter ExbB; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.808
BH720_18300	OEJ76800.1	BH720_18300	BH720_02145	Biopolymer transporter ExbB; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.755
BH720_18300	OEJ76814.1	BH720_18300	BH720_02220	Biopolymer transporter ExbB; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.755
OEJ73043.1	OEJ73047.1	BH720_21890	BH720_21885	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
OEJ73043.1	OEJ74079.1	BH720_21890	BH720_16430	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.502
OEJ73043.1	OEJ75799.1	BH720_21890	BH720_07665	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.755
OEJ73043.1	OEJ76624.1	BH720_21890	BH720_03445	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.755
OEJ73043.1	OEJ76800.1	BH720_21890	BH720_02145	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.755
OEJ73043.1	OEJ76814.1	BH720_21890	BH720_02220	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.769
OEJ73047.1	BH720_18300	BH720_21885	BH720_18300	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biopolymer transporter ExbB; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
OEJ73047.1	OEJ73043.1	BH720_21885	BH720_21890	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
OEJ73047.1	OEJ74079.1	BH720_21885	BH720_16430	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.742
OEJ73047.1	OEJ75799.1	BH720_21885	BH720_07665	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.792
OEJ73047.1	OEJ76624.1	BH720_21885	BH720_03445	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.792
OEJ73047.1	OEJ76703.1	BH720_21885	BH720_02775	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.907
OEJ73047.1	OEJ76704.1	BH720_21885	BH720_02780	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.935
OEJ73047.1	OEJ76800.1	BH720_21885	BH720_02145	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.792
OEJ73047.1	OEJ76814.1	BH720_21885	BH720_02220	Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.803