STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW24883.1Nuclear export factor GLE1; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)    
Predicted Functional Partners:
ORW24882.1
Copper resistance protein CopC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.983
ORW16550.1
Copper resistance protein CopD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.892
ORW24884.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.838
ORW24932.1
Secretion protein EspR; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.694
ORW24881.1
Ribonuclease; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
       0.475
ORW24931.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.456
ORW22452.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.442
ORW24880.1
YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.434
ORW18432.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.433
ORW22451.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.432
Your Current Organism:
Mycolicibacter nonchromogenicus
NCBI taxonomy Id: 1782
Other names: ATCC 19530, CCUG 28009, CIP 106811, DSM 44164, JCM 6364, M. nonchromogenicus, Mycobacterium nonchromogenicum, NCTC 10424
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.