ORB75557.1 protein (Mycobacterium scrofulaceum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ORB75557.1

MCE-family protein MCE3A; Derived by automated computational analysis using gene prediction method: Protein Homology. (489 aa)

Predicted Functional Partners:

ORB75705.1

0.972

ORB75556.1

0.952

ORB75706.1

0.947

ORB75558.1

0.946

ORB74862.1

0.939

ORB75559.1

0.936

ORB75560.1

0.925

ORB75707.1

0.925

ORB74096.1

0.886

ORB71459.1

0.885

Your Current Organism:

Mycobacterium scrofulaceum

NCBI taxonomy Id: 1783
Other names: ATCC 19981, CCUG 29045, CIP 105416, DSM 43992, JCM 6381, M. scrofulaceum, NCTC 10803

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ORB71459.1	ORB74096.1	BST44_21460	BST44_10735	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ORB71459.1	ORB74862.1	BST44_21460	BST44_07700	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
ORB71459.1	ORB75556.1	BST44_21460	BST44_03375	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.710
ORB71459.1	ORB75557.1	BST44_21460	BST44_03385	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	MCE-family protein MCE3A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.885
ORB71459.1	ORB75558.1	BST44_21460	BST44_03390	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
ORB71459.1	ORB75559.1	BST44_21460	BST44_03400	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	MCE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.897
ORB71459.1	ORB75560.1	BST44_21460	BST44_03405	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.895
ORB71459.1	ORB75706.1	BST44_21460	BST44_03395	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
ORB71459.1	ORB75707.1	BST44_21460	BST44_03410	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	MCE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
ORB74096.1	ORB71459.1	BST44_10735	BST44_21460	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ORB74096.1	ORB74862.1	BST44_10735	BST44_07700	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
ORB74096.1	ORB75556.1	BST44_10735	BST44_03375	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.894
ORB74096.1	ORB75557.1	BST44_10735	BST44_03385	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	MCE-family protein MCE3A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.886
ORB74096.1	ORB75559.1	BST44_10735	BST44_03400	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	MCE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.665
ORB74096.1	ORB75560.1	BST44_10735	BST44_03405	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
ORB74096.1	ORB75705.1	BST44_10735	BST44_03380	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
ORB74096.1	ORB75706.1	BST44_10735	BST44_03395	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.606
ORB74096.1	ORB75707.1	BST44_10735	BST44_03410	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	MCE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.552
ORB74862.1	ORB71459.1	BST44_07700	BST44_21460	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
ORB74862.1	ORB74096.1	BST44_07700	BST44_10735	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960

page 1 of 6

Server load: medium (54%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About